BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024B01SP1|AL428158
(1029 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig734 1961 0.0
>3x_Contig734
Length = 1760
Score = 1961 bits (988), Expect = 0.0
Identities = 1027/1035 (99%), Gaps = 6/1035 (0%)
Strand = Plus / Minus
Query: 1 gtttcaacattataacagcttcatgcgtttcggggtctgtatataatggggcaacacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1219 gtttcaacattataacagcttcatgcgtttcggggtctgtatataatggggcaacacctt 1160
Query: 61 gacagatatcttttctaaatgtttcgatctgttctgtatttctagggtttgaaacccgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1159 gacagatatcttttctaaatgtttcgatctgttctgtatttctagggtttgaaacccgag 1100
Query: 121 agattctgaccaacgttgcaatcaaccccgcag--tggaagtattgtttgtaatgagtga 178
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1099 agattctgaccaacgttgcaatcaaccccgcagggtggaagtattgtttgtaatgagtga 1040
Query: 179 cgtggactttaaccggaatttcttctccgatggtgtatcctagacagggaatctctaccg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 cgtggactttaaccggaatttcttctccgatggtgtatcctagacagggaatctctaccg 980
Query: 239 agatcttgacagtcttgttatcagcgagcatggaagcgttggaattacctgaattatttg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 agatcttgacagtcttgttatcagcgagcatggaagcgttggaattacctgaattatttg 920
Query: 299 agcttgatgaaccattagtgatagtagaggatccgcctgttttcctagtcagagacgaag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 agcttgatgaaccattagtgatagtagaggatccgcctgttttcctagtcagagacgaag 860
Query: 359 ccccgtcttgtgggtctgcagaacctgctgccataagtcttctaacatggattccattat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ccccgtcttgtgggtctgcagaacctgctgccataagtcttctaacatggattccattat 800
Query: 419 tgcttgagttgggtgattgtaagaccaccgtcttgatatttggctttggtaattggccga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 tgcttgagttgggtgattgtaagaccaccgtcttgatatttggctttggtaattggccga 740
Query: 479 cgtctattggcacaatcaactggtaatgctgcttgcaaaagataggaggcgtcttttggg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cgtctattggcacaatcaactggtaatgctgcttgcaaaagataggaggcgtcttttggg 680
Query: 539 catgaagctctgcttgaacccaatatcttatggaacccttcttaaaatctatcgagctca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 catgaagctctgcttgaacccaatatcttatggaacccttcttaaaatctatcgagctca 620
Query: 599 ccaagttcttaccattaattttacaagagaatggaaacttgtgttcaccgccagtcaagt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ccaagttcttaccattaattttacaagagaatggaaacttgtgttcaccgccagtcaagt 560
Query: 659 gtaatggattctcctcactaccataaatactcgtggacctgcaaaacactgtatcagagt 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtaatggattctcctcactaccataaatactcgtggacctgcaaaacactgtatcagagt 500
Query: 719 atttcgattttagagaacctgcggtcatcgggttattggaatggagttgaaactctccta 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atttcgattttagagaacctgcggtcatcgggttattggaatggagttgaaactctccta 440
Query: 779 tatgagcaagtttaatccaaacattaggcacatcttttctcaatcgaagcttcacagtcc 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tatgagcaagtttaatccaaacattaggcacatcttttctcaatcgaagcttcacagtcc 380
Query: 839 cactgatagtctcgttcggtttccacactctgtgcacatcatcaagtacaatttcaaact 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cactgatagtctcgttcggtttccacactctgtgcacatcatcaagtacaatttcaaact 320
Query: 899 ccaaaatgtacgatttcataccggagtgcttgaaaatggagctcttgccagcattkctca 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 319 ccaaaatgtacgatttcataccggagtgcttgaaaatggagctcttgccagcattgctca 260
Query: 959 ctgaatcg-agctactca-cmcaaatgcactaggagaa-ctcgctcagctcgttcgttcg 1015
|||||||| ||||||||| | ||||||||||||||||| |||||||||||||||||||||
Sbjct: 259 ctgaatcgaagctactcaccacaaatgcactaggagaacctcgctcagctcgttcgttcg 200
Query: 1016 a-cgcagaagtttat 1029
| |||||||||||||
Sbjct: 199 accgcagaagtttat 185
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5811
Number of Sequences: 1807
Number of extensions: 5811
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 1029
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1013
effective length of database: 10,329,639
effective search space: 10463924307
effective search space used: 10463924307
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)